First, does anyone have a picture of how the wiring looks without the fairing?
Mine looks like a$$ with clips hanging out the neck. or does the stock fairing cover this?

Second once the wiring goes in the frame from the front, were does it come out on the side?

Thanks

 

Depends which wires you're talking about, but... The wires that come out of the neck go all the way thru the neck and exit about under the seat...

As far as the mess up front, post a pic. Not really sure what you're referencing.

 

The easiest way to manipulate the main harness is to remove the rear fender. Like XFXDX said, the wiring goes in at the neck and straight down the back bone, which angles down under the seat. I know with my 04 FXD, all the wiring just went down through between the trees and headlight visor. Looks a lot better wired internally.