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It's real simple: bunch of maps on Dyna jets site to chose from. You can tweek maps yourself adding or subtract in the tables. Rpm's & throttle position. And the USB you should be able to find someone that can tune it on a dyno. It just plugs in at the ecm, passes threw it first. Can tweek timing too. It's all that's needed for the MM system.
I would think it comes with it but u have to load the program from the Dyna jets site to get program for your laptop (works best) or PC. It's a pretty common cable though, some phones the same.