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I usually shut down with the ignition switch. That way I don't have to worry about leaving lights on and returning to a dead battery. I always thought the idea for the kill switch was for emergency situations like if the bike went down.
I've always used the ignition switch for 25 years with no issues, on tbw bikes you need to use the ignition switch, on non tbw bikes it doesn't matter, the kill switch is basically a safety feature and they tell you to use it because that protects their *** in case you do something stupid
I have been using the kill switch because that's what I used on my carbed bike, however, I have read where you should not do that with a fuel injected bike. The reason given was that the weight of your hand on the throttle, even just slightly can keep the throttle open very slightly and after doing it several times, the ECM "learns" that the slight opening is the closed throttle position when actually it isn't. Over time it causes an increased idle speed. I'm now trying to get in the habit of using the key ignition switch using my right hand so I have to take my hand completely off the throttle to shut the bike off.
That actually makes sense. I think I'll try to develop that habit as well. On my Kawasaki, it had a kill switch in the stand so I just pulled up and dropped the stand and it would kill the engine then I would turn off the switch.