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It's for an active intake control not used in NA models. There is another unused plug beneath the trans for the active exhaust. It's tied off but it seems the factory never ties the intake one off.
Ron
That use to plug into the factory air breather that was removed when you upgraded to the Stage 1 filter, now the plug is not used and is usually secured somewhere. I glued mine to the flat spot under the tank and between the cylinders behind the air cleaner backing plate.